Colin Diesh

Add ability to load connection from URL bar

2

This could be used to dynamically load e.g. a single file hub

Improve usage of protein as sequence track

1

Probably want to disable three frame translation if it was detected to contain any protein letters or is configured to be a protein sequence

JBrowse 2 roadmap

3

- Integrating MSAView and Protein viewer with genome browsing experience - Mapping genome coordinates to protein coordinates to visualize impacts, if anyone in the user community has experience with things...

Add bed and bed tabix feature name indexing to CLI text-index

1

currently just does gff and vcf essentially. can also consider making it 'pluggable' for other formats but that is a larger effort

Optimize SNPCoverage rendering on large regions

6

I mentioned recently that arc view would sort of put pressure on our code to optimize other parts of our system, since arc track is often useful to view in...

- JBrowseR release process is untested and needs to be done by our team, last release was by Elliot. Ideally it is simple but needs to be done - JBrowse...

see https://snapcraft.io/docs/releasing-your-app

Add better UI for desktop auto-updates

3

Currently a dialog pops up asking if they want to upgrade, if they click yes, dialog is dismissed, update downloaded in background but no progress bar happens in background, so...

I think that the "Open sequence" dialog for jbrowse desktop is a little confusing. It can be hard to figure out how to fill out the form. At the very...