James Ferguson

Hmm, I think the docs are wrong. https://github.com/search?q=repo%3Ananoporetech%2Fpod5-file-format+num_minknow_events&type=code Can you please update? also, I think this should be returning an `int` rather than a `float` although not sure what the...

Cheers, I have also updated the pyslow5 API to handle those fields above, and my converter is now working pretty well. Now time to move on and make it go...

Might have something to do with this https://github.com/nanoporetech/pod5-file-format/issues/94 I hadn't gotten around to fixing it yet.

Hey, I'll have a better look at this tomorrow, but the divide by zero looks like genome size was never populated, which means maybe the genome wasn't picked up. What...

From the logs, it looks like this is the issue ``` Running: bcftools consensus -f Test_7_NCOV_02_RB07.preconsensus.fasta Test_7_NCOV_02_RB07.pass.vcf.gz -m Test_7_NCOV_02_RB07.coverage_mask.txt -o Test_7_NCOV_02_RB07.consensus.fasta Command failed:bcftools consensus -f Test_7_NCOV_02_RB07.preconsensus.fasta Test_7_NCOV_02_RB07.pass.vcf.gz -m Test_7_NCOV_02_RB07.coverage_mask.txt -o...

can you share the commands you ran to manually check?

Yea, this is a known bug, as the task checker isn't triggered initially. It's a bit of a chicken/egg problem, but i'll look into it.

Opening new issue: Hello @ShawnSimp, Could you drop me the full error message? Could be your bed wasn't picked up along with a certain set of circumstances my error handling...

Hello, What is the data path set in the config on the home page? And what is selected when you are on the parameters page?

If the folder that is then selected in the parameters page, also contains the fastq files, it will throw that error. Quick fix should be to throw the data into...