James Ferguson
James Ferguson
Hello, I simulated some reads and gave it `-n 1000` but it gave me 2000 reads as an output. Is this by design or is this a bug? Thanks
Hello, I'm interested in using this tool, but before I go down the rabbit hole of installing this tool, I would like to know if it works with long read...
Hello, I was looking to test a simple kmer counter I wrote , but the dataset link isn't working https://ccb.jhu.edu/gage_b/datasets/index.html Is there another place I can get them, or and...
When running porechop, I came across unexpected output when identifying the barcodes on 10k sample reads. It seems it takes the first 10k reads, however I concatenated the outputs of...
Howdy, I had an issue where a few people wanted to use porechop at the same time, but with different adapters.py settings. I have forked and implemented a dirty hack...
Hey again, I wanted to know a little more about the following fields. ``` num_minknow_events, tracked_scaling_scale, tracked_scaling_shift, predicted_scaling_scale, predicted_scaling_shift, num_reads_since_mux_change, time_since_mux_change, ``` Specifically: `num_minknow_events` : What is this actually? is...
Hello, I was wondering how different the R9.4 model is to R9.4.1, or R9.5 ? Is there a significant difference? If there is, is it possible to get the R9.5...
list the protein variant, like `S123G` in the output report. Can probably list int the variant table in another column Request from noncodo (Martin)
@Krysasp can I get some more clarity on how you solved this issue? i'm get the same " UnboundLocalError: local variable 'bed_file' referenced before assignment " error at the moment...
Add an option to autodetect barcodes and process all of them with default sample names, rather than requiring a csv file assigning sample to barcode. This isn't ideal for clinical...