Illumina

Results 32 repositories owned by Illumina

hap.py

396
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119
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Haplotype VCF comparison tools

paragraph

145
Stars
28
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Graph realignment tools for structural variants

strelka

350
Stars
102
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Strelka2 germline and somatic small variant caller

manta

388
Stars
151
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Structural variant and indel caller for mapped sequencing data

canvas

119
Stars
20
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Canvas - Copy number variant (CNV) calling from DNA sequencing data

DRAGMAP

146
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28
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DRAGEN open-source mapper

ExpansionHunter

167
Stars
52
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A tool for estimating repeat sizes

Nirvana

162
Stars
43
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The nimble & robust variant annotator

pyflow

143
Stars
44
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A lightweight parallel task engine

interop

75
Stars
26
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C++ Library to parse Illumina InterOp files