variant-calling topic

Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data

sanjaynagi

Sentieon DNAseq

Sentieon

Reference-free variant discovery in large eukaryotic genomes

kevlar-dev

ClairS-TO - a deep-learning method for tumor-only somatic variant calling

HKU-BAL

Complex structural variant detection from WGS data

SUwonglab

A flexible, scalable, and reproducible pipeline to automate variant calling from sequence reads.

moiexpositoalonsolab

Simple pileup-based variant caller

lh3

Please consider using/contributing to https://github.com/nf-core/sarek

nf-core