illumina topic

A collection of publications on comparison of high-throughput sequencing technologies.

Nazeeefa

Aligns short reads using dynamic seed size with strobemers

ksahlin

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

OpenGene

Viral genomics analysis pipelines

broadinstitute

A collection of scripts and notes related to genomics and bioinformatics

igordot

Assembly and intrahost/low-frequency variant calling for viral samples

nf-core

Analysis pipelines for genomic sequencing data

igordot

An accurate and ultra-fast hybrid genome assembler

adigenova

Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics

parklab

Parse Illumina sample sheets with Python

clintval