scrna-seq-data topic

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

seandavi

AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available fro...

nsalomonis

Coarse-graining of large single-cell RNA-seq data into metacells

GfellerLab

metadata and data from the database

oscar-franzen

🦠 Regularly updated list of publicly available datasets with single-cell (scRNAseq) and T-cell/antibody immune repertoire (AIRR / RepSeq / immunosequencing) data of COVID-19 patients with SARS-CoV-2.

immunomind

Cell2Sentence turns scRNA-seq data into text for LLM training.

vandijklab

Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution

randel

The Cornell Single-Cell Muscle Project (scMuscle) aims to collect, analyze and provide to the research community skeletal muscle transcriptomic data

mckellardw