Sean Davis

Results 11 repositories owned by Sean Davis

awesome-single-cell

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Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

awesome-cancer-variant-databases

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A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.

sars2pack

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An R package with over 50 highly cited, read-to-use, up-to-date COVID-19 pandemic data resources

GEOquery

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The bridge between the NCBI Gene Expression Omnibus and Bioconductor

Bioc2017BigDataWorkshopSession

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Tutorial for working with cloud infrastructure and AWS from R

BiocPkgTools

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Computable build reports, package metadata, and download stats from the Bioconductor project

BuildABiocWorkshop

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Template for building a bioconductor workshop package using github actions

ci4cc-informatics-resources

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Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are developing.

wdlRunR

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Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources

MachineLearningIntro

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Machine learning use cases for teaching