Sean Davis
Sean Davis
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
awesome-cancer-variant-databases
A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.
sars2pack
An R package with over 50 highly cited, read-to-use, up-to-date COVID-19 pandemic data resources
GEOquery
The bridge between the NCBI Gene Expression Omnibus and Bioconductor
Bioc2017BigDataWorkshopSession
Tutorial for working with cloud infrastructure and AWS from R
BiocPkgTools
Computable build reports, package metadata, and download stats from the Bioconductor project
BuildABiocWorkshop
Template for building a bioconductor workshop package using github actions
ci4cc-informatics-resources
Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are developing.
wdlRunR
Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
MachineLearningIntro
Machine learning use cases for teaching