samtools topic

WebAssembly modules for genomics

biowasm

Efficient pythonic random access to fasta subsequences

mdshw5

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

seqan

NGLess: NGS with less work

ngless-toolkit

A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too

divonlan

Learning the Sequence Alignment/Map format

davetang

teepean

Multi-sample somatic variant caller

IARCbioinfo

Work with bioinformatic files using Arrow, Polars, and/or DuckDB

wheretrue

A pipeline to investigate horizontal gene transfer from NGS data

nf-core