pathway-analysis topic

List pathway-analysis repositories

enrichplot

219
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62
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Visualization of Functional Enrichment Result

altanalyze

91
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29
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AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available fro...

GeneTonic

75
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8
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Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail

ipcc_sr15_scenario_analysis

64
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30
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Scenario analysis notebooks for the IPCC Special Report on Global Warming of 1.5°C

msigdbr

65
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12
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MSigDB gene sets for multiple organisms in a tidy data format

geneSCF_inactive

20
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8
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GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF

pathways

22
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7
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Disease pathways in the human interactome

chise.js

15
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6
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A web application to visualize and edit the pathway models represented by SBGN Process Description Notation

newt

53
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27
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A web application to visualize and edit pathway models

pathway-mapper

55
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28
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PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways