enrichment-analysis topic

List enrichment-analysis repositories

clusterProfiler

951
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247
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:bar_chart: A universal enrichment tool for interpreting omics data

enrichplot

219
Stars
62
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Visualization of Functional Enrichment Result

GSEApy

609
Stars
125
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Gene Set Enrichment Analysis in Python

msigdbr

65
Stars
12
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MSigDB gene sets for multiple organisms in a tidy data format

DOSE

105
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34
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:mask: Disease Ontology Semantic and Enrichment analysis

geneSCF_inactive

20
Stars
8
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GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF

rtfbs_db

22
Stars
9
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Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.

sig-bio-shiny

40
Stars
9
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A standalone interactive application for detecting biological significance on a set of genes