enrichment-analysis topic
open-semantic-etl
Python based Open Source ETL tools for file crawling, document processing (text extraction, OCR), content analysis (Entity Extraction & Named Entity Recognition) & data enrichment (annotation) pipelin...
clusterProfiler
:bar_chart: A universal enrichment tool for interpreting omics data
enrichplot
Visualization of Functional Enrichment Result
GSEApy
Gene Set Enrichment Analysis in Python
msigdbr
MSigDB gene sets for multiple organisms in a tidy data format
DOSE
:mask: Disease Ontology Semantic and Enrichment analysis
geneSCF_inactive
GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF
rtfbs_db
Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.
sig-bio-shiny
A standalone interactive application for detecting biological significance on a set of genes
biomedical-knowledge-mining-book
:books: Biomedical knowledge mining using GOSemSim and clusterProfiler