gene-sets topic
List
gene-sets repositories
ssGSEA2.0
225
Stars
76
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Watchers
Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)
liger
55
Stars
11
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Lightweight Iterative Gene set Enrichment in R
BioBombe
63
Stars
23
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BioBombe: Sequentially compressed gene expression features enhances biological signatures
msigdbr
65
Stars
12
Forks
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MSigDB gene sets for multiple organisms in a tidy data format
myTAI
39
Stars
16
Forks
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Evolutionary Transcriptomics with R
snpsea
35
Stars
9
Forks
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:bar_chart: Identify cell types and pathways affected by genetic risk loci.
enrichment_analysis
19
Stars
0
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A Snakemake workflow for performing genomic region set and gene set enrichment analyses using LOLA, GREAT, GSEApy, pycisTarget and RcisTarget.