hla-typing topic

📚 Tools and databases for analyzing HLA and VDJ genes.

slowkow

xHLA: Fast and accurate HLA typing from short read sequence data

humanlongevity

Precision HLA typing from next-generation sequencing data

nf-core

SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, and -DRB1 genes. Also, it supports both short- and long-read da...

deepomicslab

Kourami: Graph-guided assembly for HLA alleles

Kingsford-Group

An HLA star-calling tool for PacBio HiFi data types

PacificBiosciences

Clinical Whole Genome and Exome Sequencing Pipeline

OpenOmics

HLA typing for Sanger Based Test

BGI-flexlab