Kamil Slowikowski

📚 Tools and databases for analyzing HLA and VDJ genes.

slowkow

:bug: How to use CENTIPEDE to determine if a transcription factor is bound.

slowkow

:round_pushpin: Repel overlapping text labels away from each other in your ggplot2 figures.

slowkow

:dart: Human transcription factor target genes from 6 databases in convenient R format.

slowkow

:snake: Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).

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:card_index: Retrieve data in genomic intervals with a Python interface for tabix.

slowkow

🎼 Integrate multiple high-dimensional datasets with fuzzy k-means and locally linear adjustments.

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🧭 Navigate single-cell RNA-seq datasets in your web browser.

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:vertical_traffic_light: Run Picard on BAM files and collate 90 metrics into one file.

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:bookmark: Get SNP proxies from the 1000 Genomes Project.

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