gwas topic
locuszoom
A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.
pyseer
SEER, reimplemented in python 🐍🔮
mtag
Python command line tool for Multi-Trait Analysis of GWAS (MTAG)
LDBlockShow
LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
polyfun
PolyFun (POLYgenic FUNctionally-informed fine-mapping)
gchromVAR
Cell type specific enrichments using finemapped variants and quantitative epigenetic data
adjclust
Adjacency-constrained hierarchical clustering of a similarity matrix
qmplot
A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.
S-PCGC
Heritability, genetic correlation and functional enrichment estimation for case-control studies
scDRS
Single-cell disease relevance score (scDRS)