linkage-disequilibrium topic

PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files

BGI-shenzhen

Adjacency-constrained hierarchical clustering of a similarity matrix

pneuvial

:bookmark: Get SNP proxies from the 1000 Genomes Project.

slowkow

Fast calculations of linkage-disequilibrium in large-scale human cohorts

mklarqvist

LDlinkR

CBIIT

Causal Mixture Model for GWAS summary statistics

precimed

LDlink is a suite of web-based applications designed to easily and efficiently interrogate linkage disequilibrium in population groups. Each included application is specialized for querying and displa...

CBIIT

Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.

RajLabMSSM

R front-end for TASSEL

maize-genetics

Modeling and Analysis of (Statistical) Genetics data in python

shz9