linkage-disequilibrium topic
List
linkage-disequilibrium repositories
PopLDdecay
175
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53
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PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files
adjclust
16
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8
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Adjacency-constrained hierarchical clustering of a similarity matrix
proxysnps
28
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9
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:bookmark: Get SNP proxies from the 1000 Genomes Project.
tomahawk
39
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9
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Fast calculations of linkage-disequilibrium in large-scale human cohorts
mixer
49
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16
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Causal Mixture Model for GWAS summary statistics
nci-webtools-dceg-linkage
21
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11
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LDlink is a suite of web-based applications designed to easily and efficiently interrogate linkage disequilibrium in population groups. Each included application is specialized for querying and displa...
echolocatoR
29
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11
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Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.
rTASSEL
22
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10
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R front-end for TASSEL