gwas-tools topic

List gwas-tools repositories

locuszoom

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A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

qmplot

33
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11
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A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.

kGWASflow

25
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8
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kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.

BANNs

20
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3
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Code and simulations using biologically annotated neural networks

hogwash

19
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5
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Three bacterial GWAS methods all rolled into one easy-to-use R package

PLACO

19
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5
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A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics