genomics-visualization topic

List genomics-visualization repositories

covviz

56
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7
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Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata

deepStats

31
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3
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deepStats: a stastitical toolbox for deeptools and genomic signals

MGCplotter

34
Stars
6
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Microbial Genome Circular plotting tool for comparative genomics using Circos

pyGenomeViz

237
Stars
19
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A genome visualization python package for comparative genomics

cellar

31
Stars
7
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Interactive software tool for the assignment of cell types in single-cell studies.

radiator

57
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22
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RADseq Data Exploration, Manipulation and Visualization using R

stackr

26
Stars
8
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stackr: an R package to run stacks software pipeline

trackhub

51
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20
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create, manage, and upload track hubs for use in the UCSC genome browser

ezancestry

56
Stars
11
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Easy genetic ancestry predictions in Python

jbrowse-jupyter

23
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3
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A python package for showing JBrowse views