batch-effects topic
List
batch-effects repositories
kBET
147
Stars
23
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An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.
ComBat-seq
149
Stars
39
Forks
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Batch effect adjustment based on negative binomial regression for RNA sequencing count data
mnnpy
71
Stars
31
Forks
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An implementation of MNN (Mutual Nearest Neighbors) correct in python.
radiator
59
Stars
23
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RADseq Data Exploration, Manipulation and Visualization using R
BEER
23
Stars
8
Forks
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BEER: Batch EffEct Remover for single-cell data
scBatch
17
Stars
9
Forks
Watchers
Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment