James A. Fellows Yates
James A. Fellows Yates
This would be a good question for someone like @rayanhassaine or @scwatts ! It should be documented, here: https://github.com/nf-core/test-datasets/tree/oncoanalyser But I don't see anything currently. Maybe it can be updated?
Side note: sould it be `--consesnsus_tool` or `conssensus_sequence_tool`? Could condense `--run_consensusseuqence` instead for example, if that's the top level thing
@aidaanva I've got to the the point where the 'latest' error is now within the `CONSENSUS_SEQUENCE` subworkflow, so you can continue from there :) It's a proper `join` error now...
- Another binner that has been bandied around is SemiBin (which I think is quite new) - There is also https://github.com/nf-core/mag/issues/714 which is 'meant' to replace metaWRAP as bin refiner...
Hi @mattiassherman ! I think it would be a great idea! The only problem is that I don't know if any of the dev team any experience in variation graph...
OK, maybe then re-visit this issue in a couple of months once we've released eager v3, and you've progressed a bit further :)
The GPUs labels are new, and indeed not well documented... but theoretically you can add the labels to the modules and people hsould be able to start using GPUS (I've...
(I think ti's a good idea though!)
I think as a general thing we need to replace our test-dataset, it's not great in many cases...