James A. Fellows Yates

icon indicating a website link jafy.eu icon indicating an email [email protected]

icon company HKI Jena, MPI-EVA Leipzig icon location Leipzig, Germany icon location Bioinformatician with specialism in ancient DNA and metagenomics. nf-core core-team member and SPAAM community founder. @[email protected]

Results 799 comments of James A. Fellows Yates

Replace references to gather town with workadventure

Only thing I couldn't work out wasn't the logo/icon... I did find an SVG though ![Logo-and-typo](https://github.com/user-attachments/assets/a3de4d54-148d-41b6-b0ee-70077a2773b2)

Replace references to gather town with workadventure

Completely forgot about this, sorry @mashehu

Replace check_max function with resourceLimits directive

I tested locally by running the `nf-core/test-pipeline` example in the CI. By adjusting `--max_memory` to 16, the FASTQC process that would normally get 32GB (label_medium) was indeed capped at 16...

Replace check_max function with resourceLimits directive

OK the tasks from the slack thread [here](https://nfcore.slack.com/archives/CE5LG7WMB/p1719320972375759) - [x] Remove all references to `--max_*` parameters - [x] Add lint tests (so people remove the parameters) - [x] Set new...

Replace check_max function with resourceLimits directive

@nf-core-bot fix linting

Replace check_max function with resourceLimits directive

Yes I think we can do but we Just have to be careful that people don't try to use dev to generate pipelines because configs won't work, I'll try and...

Add list of specific core day-to-day tasks

@nf-core-bot fix linting

Fix typo in variable name in CHECKM/QA (plus some formatting fixes)

Apparently 😮‍💨😮‍💨😮‍💨😮‍💨, yes I will

Fix typo in variable name in CHECKM/QA (plus some formatting fixes)

Already solved in https://github.com/nf-core/modules/pull/7119

Add citation.cff file for better Zenodo archiving metadata information

Thanks @turbomam looks good to me!