Chris Wright
Chris Wright
> I guess that's how a join works in general Yup! Anything not in the key can (and should) be assumed to be distinct. Filtering the list of "column" down...
> That is not the same as saying there is zero confidence in the call. Quite the opposite infact I would tend to agree, particularly given the background here is...
I've close this for now, as I had a failed build in our CI system. There might be some simple compiler flags to change.
This two stage approach requires -fPIC to be set when building libminimap.a on Linux.
I'm still in two minds as to whether this is the best way to perform the build. It has the advantage of not needing to duplicate and maintain the tortuous...
This thread may be helpful to you: https://github.com/nanoporetech/medaka/issues/456#issuecomment-1711947247
I just realised I don't think it will because arm64 runners are only a beta feature still on github actions.
Hi Andre, Thank you for your detailed response, its all very helpful. I will try some of the approaches you have suggested, and failing that take the hit on merging...
The code that performs these checks is [here](https://github.com/nanoporetech/medaka/blob/master/medaka/__init__.py#L39). You'll see it doesn't do much other than run the commands. I'm afraid I can't suggest a reason why these checks are...
@slugb0t Did you ever figure this out? I'm experiencing the same.