Chris Wright

For my money it should be kept. I'm unconvinced that meson is as popular as it's proponents sometimes claim, and or better or worse cmake is more the entrenched standard....

Not the most scientific experiment but grepping through bioconda recipes their are 497 occurences of "cmake" and only 31 of "meson". The meson hits appear to be exclusively PacBio related...

I'd echo Erik's comments, other than not being surprised about not running into meson: I'm not surprised because its simply not widely used (as far as I can tell, the...

Hi, I'm just considering creating a package for conda to go in bioconda. I'll let you know how I get on.

I've put nextalign for linux there using your binaries on the Github release page. This seems to be acceptable given the number of bioconda packages create with static binaries. There's...

For the time being we've (Oxford Nanopore Technologies) have added the nextclade node CLI to a custom conda channel: https://anaconda.org/epi2melabs/nextclade-cli

@mwykes Would be good to track from which tests these are coming and make sure they are being written to a proper tempdir.

Hi @jd3234, As a piece of research software, I suspect this isn't something we will have time to implement. If you'd like to send a pull request making the changes...

This section is the only part of the error I can see relating to medaka code (the rest is to do with multiprocessing): medaka/stitch.py", line 231, in stitch for (rname,...

@gordonrix You will have to share you code for us to understand better the error you are seeing. Also your input files. I would expect the big/small file effect simply...