Chris Wright
Chris Wright
I believe this is fixed now. The install now works for me, and I see commits where the installation files were amended to make cython a build dependency.
@guhuajun We've actually built a pydantic model for eCharts after extracting the schema in the eCharts documentation build: https://github.com/epi2me-labs/ezcharts Its not perfect: its highly redundant and there are various things...
Closing as stale.
@wn835166087 and @Ashma45, You are in unchartered waters. Mixing data from two basecaller variants is not something we have tested and therefore would not advise. If possible try to basecall...
@jeffdaily, I was looking to add linux aarch64 wheels to the CI. Should this be trivially possible now?
Closing through lack of response.
We are preparing a new release. However unfortunately some of medaka's dependencies are yet to be available for Python 3.12, so the new release will likely support only up to...
If I recall correctly conda packages are typically built with `-march=haswell`, the generation after sandybridge. This gives you access to SSE4.2 and AVX2, but not AVX512. Haswell is more than...
I'm sorry, I cannot comment on why medaka consensus has failed within a 3rd party pipeline. If you can provide a standalone, reproducible example with complete input and output then...
It would be best done as separate runs.