James Ferguson

Results 228 comments of James Ferguson

Hey, Just checking in. I'm back from leave now. I'll be looking at this issue specifically tomorrow. So get back to you soon :) James

Hello, I have been able to reproduce this issue. When calling, you are using the `--call_mods` flag. This flag should only be used in conjunction with a model that calls...

Hey, Oh interesting! None of that was in any of the Change logs they wrote up. Anyway, let me have a closer look and see what I can do. I'll...

Ahh yes indeed I can't seem to get it to call mods through my debug methods. I am following up with ONT to see if the mod calling with this...

Hey, Okay so ONT got back to me. Dorado server version 7.2.13 does NOT have support for m6A_DRACH yet. It will be coming "soon" in a new release, but I'll...

Hey, So following this up since the release of 7.4.12 dorado server, they have this change in their release notes ``` Added support for the [email protected]_m6A_DRACH@v1 modified base RNA model...

This should now work with https://github.com/Psy-Fer/buttery-eel/releases/tag/v0.5.0 Cheers, James

Hey there, could you please update to version 0.4.1 and try again? This is the latest version (I released it yesterday), for supporting dorado-server. Also it looks like you aren't...

The latest verison of guppy_barcoder in the dorado_server release apparently fixes the memory leak issue, and may have some other features. we should check that out before I do something...

Yea latest ont_barcoder takes bam as an input