MuSiC

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An error in music2_prop_t_statistics function

1

hello,everyone, I run my code as follow: library(MuSiC2) library(MuSiC) library(bseqsc) setwd("D:/cibersortx/Music/music2") ## Bulk RNA-seq data benchmark.eset = readRDS("bulk-eset.rds") benchmark.eset # clinical conditions table(benchmark.eset$group) bulk.control.mtx = exprs(benchmark.eset)[, benchmark.eset$group == 'healthy'] bulk.case.mtx...

herong2006

Here is the error : Downloading GitHub repo xuranw/MuSiC@HEAD MatrixModels (0.5-0 -> 0.5-1) [CRAN] rlang (1.0.2 -> 1.0.6) [CRAN] lifecycle (1.0.1 -> 1.0.3) [CRAN] cli (3.3.0 -> 3.4.1) [CRAN] vctrs...

alexdray86

Memory requirements

1

Hi, MuSiC is crashing with a single-cell reference of ~120k cells and 36 bulk samples due to memory limitations, even with 128 Gb RAM. What are the memory requirements? Thanks

gevro