taxonomic-classification topic

Tag and recommend Python exercises based on algorithmic features

laowantong

Fast taxonomic classification of metagenomic sequencing reads using a protein reference database

bioinformatics-centre

Quickly search, compare, and analyze genomic and metagenomic data sets.

sourmash-bio

Accurate metagenomic profiling && Fast large-scale sequence/genome searching

shenwei356

Amplicon sequencing analysis workflow using DADA2 and QIIME2

nf-core

Massively parallel phylogenetic placement of genetic sequences

pierrebarbera

PyTorch implementation of Metric-Guided Prototype Learning for hierarchical classification.

VSainteuf

Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

nf-core

This repository contains all the source files required to run DeLUCS, a deep learning clustering algorithm for DNA sequences.

millanp95

Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).

smdabdoub