16s topic

List 16s repositories

ampliseq

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Amplicon sequencing analysis workflow using DADA2 and QIIME2

microbiomeutilities

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The is mostly a wrapper tool using phyloseq and microbiome R packages.

DAtest

48
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Compare different differential abundance and expression methods

MicEco

40
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Various functions for analysis of microbial community data

SINA

40
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4
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SINA - Reference based multiple sequence alignment

16S-rDNA-V3-V4

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16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Demo: https://ycl6.github.io/16S-Demo/

Esp-Seplos-Controller

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Seplos Controller mit Webseite Der Esp8266 ist über ein Rs485 Modul mit dem Seplos BMS verbunden und kann diesem seine Daten entlocken. Shutdown Button: Das BMS wird ausgeschaltet , selbe Art als ob m...

porefile

22
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4
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A Nextflow full-length 16S profiling pipeline for ONT reads

RDPTools

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Collection of commonly used RDP Tools for easy building

Microbiome-Analysis-Using-R

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Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.