somatic topic

Detect and visualize target mutations by scanning FastQ files directly

OpenGene

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

nf-core

Personal Cancer Genome Reporter (PCGR)

sigven

Generate duplex/single consensus reads to reduce sequencing noises and remove duplications

OpenGene

Dockstore implementation of CGP core WGS analysis

cancerit