REFRESH Bioinformatics Group

Results 10 repositories owned by REFRESH Bioinformatics Group

FAMSA

133
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26
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Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)

kmer-db

74
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16
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Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, etc.).

agc

79
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6
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Assembled Genomes Compressor

colord

46
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11
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A versatile compressor of third generation sequencing reads.

DSRC

51
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21
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DSRC - DNA Sequence Reads Compressor

KMC

189
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56
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Fast and frugal disk based k-mer counter

ORCOM

15
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4
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Overlapping Reads COmpression with Minimizers

PHIST

25
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1
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Phage-Host Interaction Search Tool

VCFShark

16
Stars
2
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Whisper

24
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3
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