mass-spectrometry topic

List mass-spectrometry repositories

pymsfilereader

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Thermo MSFileReader Python bindings

batmass

35
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8
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Mass spectrometry data visualization

xcms

175
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This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis

OpenMS

459
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The codebase of the OpenMS project

pymzML

155
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91
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pymzML - an interface between Python and mzML Mass spectrometry Files

alphapept

167
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29
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A modular, python-based framework for mass spectrometry. Powered by nbdev.

FragPipe

165
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35
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A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for comprehensive analysis of shotgun proteomics data

MSnbase

120
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50
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Base Classes and Functions for Mass Spectrometry and Proteomics

matchms

166
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57
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Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.

ElMaven

85
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52
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LC-MS data processing tool for large-scale metabolomics experiments.