peptides topic

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

lightdock

An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.

dosorio

andrewrech

Collects software dedicated to predicting specific properties of peptides

BioGenies

This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network

lkytal

Deep (Transfer) Learning for Peptide Retention Time Prediction

horsepurve

DeepLC: Retention time prediction for (modified) peptides using Deep Learning.

compomics

🧬 Toolkit for generating various numerical features of protein sequences

nanxstats

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

lightdock

Identify and quantify MHC eluted peptides from mass spectrometry raw data

nf-core