immunoinformatics topic

🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires

immunomind

andrewrech

An R package to analyze single-cell V(D)J data

rnabioco

Comparison of Adaptive Immune Receptor Repertoires

uio-bmi

Statistical classifier for immune repertoires

jostmey

🦠 Regularly updated list of publicly available datasets with single-cell (scRNAseq) and T-cell/antibody immune repertoire (AIRR / RepSeq / immunosequencing) data of COVID-19 patients with SARS-CoV-2.

immunomind

[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.

imminfo

PepTools - An Immunoinformatics (Immunological Bioinformatics) R-package for working with peptide data

leonjessen

CDR3 clustering module providing a new method for fast and accurate clustering of large data sets of CDR3 amino acid sequences, and offering functionalities for downstream analysis of clustering resul...

svalkiers

Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.

wuaipinglab