gene-regulation topic
List
gene-regulation repositories
findr
21
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4
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Fast Inference of Networks from Directed Regulations
dREG
31
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21
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Detecting Regulatory Elements using GRO-seq and PRO-seq
ChromDragoNN
44
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11
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Code for the paper "Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellular contexts"
arboreto
46
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24
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A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.
pyjaspar
18
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1
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pyJASPAR: A Pythonic interface to JASPAR transcription factor motifs
scMLnet
21
Stars
8
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Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks