bioinformatics-pipeline topic

List bioinformatics-pipeline repositories

deepchain-apps

27
Stars
6
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A library for deploying App on deepchain.bio

nf-gwas-pipeline

29
Stars
17
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A Nextflow Genome-Wide Association Study (GWAS) Pipeline

awesome-structural-bioinformatics

59
Stars
9
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Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.

phigaro

46
Stars
15
Forks
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Phigaro is a scalable command-line tool for predicting phages and prophages

RNAlysis

124
Stars
13
Forks
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Analyze your RNA sequencing data without writing a single line of code

CD4-csaw

16
Stars
1
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Reproducible reanalysis of a combined ChIP-Seq & RNA-Seq data set

conda-env-builder

35
Stars
4
Forks
Watchers

Build and maintain multiple custom conda environments all in one place.

genomedisco

25
Stars
10
Forks
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Software for comparing contact maps from HiC, CaptureC and other 3D genome data.

workflows

18
Stars
4
Forks
Watchers

Bioinformatics curated workflows that use Biocontainers tools