bioinformatics-pipeline topic

List bioinformatics-pipeline repositories

ReactomePy

21
Stars
4
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Explore biomolecular pathways in Reactome from the command-line or a Python script

IgDiscover-legacy

17
Stars
9
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Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads

looper

20
Stars
7
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A job submitter for Portable Encapsulated Projects

chipimputation

19
Stars
20
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Genotype Imputation Pipeline for H3Africa

seroba

16
Stars
16
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k-mer based Pipeline to identify the Serotype from Illumina NGS reads

nb_distribution

26
Stars
6
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novoBreak: local assembly for breakpoint detection in cancer genomes

seqsender

38
Stars
14
Forks
38
Watchers

Automated Pipeline to Generate FTP Files and Manage Submission of Sequence Data to Public Repositories

celseq2

19
Stars
13
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Generate the UMI count matrix from CEL-Seq2 sequencing data

repeatcraftp

22
Stars
5
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meta-pipeline for repetitive element de-fragmentation and annotation