Theis Lab

Results 31 repositories owned by Theis Lab

cellrank

305
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38
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CellRank: dynamics from multi-view single-cell data

scarches

314
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49
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Reference mapping for single-cell genomics

scgen

248
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51
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Single cell perturbation prediction

diffxpy

175
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23
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Differential expression analysis for single-cell RNA-seq data.

kBET

147
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23
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An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.

zellkonverter

132
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26
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Conversion between scRNA-seq objects

anndata2ri

114
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16
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Convert between AnnData and SingleCellExperiment

scCODA

137
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23
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A Bayesian model for compositional single-cell data analysis

AutoGeneS

53
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8
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batchglm

26
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9
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Fit generalized linear models in python.