Sam Morabito
Sam Morabito
Closing due to inactivity.
I was running it on my laptop with only 16 gb of memory so might have been a memory issue. Do you have a sense for how much memory is...
Hi, I have not tested hdWGCNA with Visium HD, but I think it could work in theory. Since I have not tried it, I currently have no recommendation on how...
Hi, [Please see this tutorial for using Visium HD data.](https://smorabit.github.io/hdWGCNA/articles/ST_basics.html#x-visium-hd-dataset)
Hi, Can you please provide the code that you used which produced this error message? Any other relevant information would also help. It would also help me to know if...
Closing this issue for now due to inactivity.
From the backtrace it looks like there is a problem with the way that it is trying to subset your data. Unfortunately it is very difficult for me to resolve...
Hi, I just tested this and I am not able to reproduce the error. I am able to run this function without specifying `label_col`, so I am not sure what...
Hi @feanaros, In theory it should be possible to use hdWGCNA with scATAC coverage data. However I have not actually done this before, so I don't have a specific recommendation....
Thanks for pointing this out. It looks like these arguments are used in older versions of WGCNA. For example see the [documentation of this function in version 1.2](https://www.rdocumentation.org/packages/WGCNA/versions/1.20/topics/blockwiseConsensusModules). I am...