single-cell-genetics
single-cell-genetics
singlecell_neuroseq_paper
Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation
cardelino
Clone identification from single-cell data
cellSNP
Pileup biallelic SNPs from single-cell and bulk RNA-seq data
cellsnp-lite
Efficient genotyping bi-allelic SNPs on single cells
vireo
Demultiplexing pooled scRNA-seq data with or without genotype reference
XClone
Detection of allele-specific subclonal copy number variations from single-cell transcriptomic data.
singlecell_endodiff_paper
Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression
MQuad
Tool for modelling of mitochondrial heteroplasmy