modules

modules copied to clipboard

It's failing on some HPC systems

edmundmiller

new module: dnaapler

2

### Is there an existing module for this? - [x] I have searched for the existing module ### Is there an open PR for this? - [x] I have searched...

samuelmontgomery

bump vcf2maf to ensembl-vep=113.4 and update containers

2

Bump ensembl-vep to 113.4 and change references to new seqera containers for vcf2maf. ## PR checklist Closes #XXX - [ ] This comment contains a description of changes (with reason)....

JustinBellavance

follow up https://github.com/nf-core/modules/pull/6659/files

mirpedrol

new module: t1k

2

### Is there an existing module for this? - [x] I have searched for the existing module ### Is there an open PR for this? - [x] I have searched...

dimitrios-pm

## PR checklist Closes #XXX - [ ] This comment contains a description of changes (with reason). - [ ] If you've fixed a bug or added code that should...

matthdsm

new module: deconwolf

1

### Is there an existing module for this? - [x] I have searched for the existing module ### Is there an open PR for this? - [x] I have searched...

felixS27

MultiQC report handling for AWS batch with S3 workDir Fix https://github.com/nf-core/modules/issues/9424 ## PR checklist Closes #XXX - [x] This comment contains a description of changes (with reason). - [x] If...

SZhengP

### Have you checked the docs? - [x] [nf-core website: troubleshooting](https://nf-co.re/usage/troubleshooting) - [x] [nf-core modules documentation](https://nf-co.re/docs/contributing/modules) ### Description of the bug In the `utils_nfcore_pipeline` workflow, the `completionEmail` function is defined...

SZhengP

feat: addition of vembrane sort module

7

## PR checklist Fixes #9265 Addition of the vembrane sort module https://github.com/vembrane/vembrane - [X] This comment contains a description of changes (with reason). - [X] If you've fixed a bug...

mkatsanto