Mathias Goncalves
Mathias Goncalves
I would be okay with this, but just my 0.02 - I don't think it quite fits in `--ignore`, as to me that should be reserved for *ignoring* certain attributes...
`--skip-bids-validation` seems like a reasonable argument to deprecate and include in `--skip`.
is this happening with the LTS, or just 21.0.x(rc)s?
Looks like this is not exclusive to multi-echo (see #2761)
I believe this was fixed in https://github.com/nipreps/fmriprep/pull/2731
I like the idea of propagating the arguments used - is there a standardized way to convey this within the `dataset_description.json`? If not, I think the most logical place would...
Yes, I think this is a worthwhile addition. I'm envisioning it as either `fmriprep ... group`, or as a standalone script (added as an entrypoint). For simplicity, it should be...
hi @hstojic - is this ready for another review? anything I can do to help?
we should be excluding `.git/` files, so I guess it's possible this path is being resolved after the fact (are you using a `layout_config.json` file to control indexing?) I'm not...
@yuketeng please reopen if you are still having issues