A. Murat Eren (Meren)
A. Murat Eren (Meren)
Thanks, Iva! I am sorry for not tagging this request. The program does not fully address the need described here since it is not a part of `anvi-profile`. The class...
Self note: It will be EXTREMELY IMPORTANT to manually carry in every change that is made in `utils.py` after `2025-08-04` into the new utils modules carefully. The is necessary due...
Oh no, not at all. Better code > Meren's life.
Thank you very much for this, @FlorianTrigodet! I think it would be great if we could translate your README.txt into something that could go into the help docs for [anvi-estimate-trna-taxonomy](https://anvio.org/help/main/programs/anvi-estimate-trna-taxonomy/)...
Plus, what do you mean by that you tested and it worked? Does it mean you run the old and new database on a few contigs-db files do you get...
I had suggested `anvi-estimate-trna-taxonomy`, but I think `anvi-setup-trna-taxonomy` would be much better to keep that information I guess :)
Hey @shanexuuu, Unfortunately there are two things to consider here. * Anvi'o interactive interface is not designed to handle more than 100,000 SVG objects at a given time. You can...
Hey @alexanderjaffe, this looks like a bug from 3 yers ago, similar to #1936 :( Do you think you switch to anvi'o v8 or anvi'o dev? I'm sure it will...
Hey @alexanderjaffe, Migration should not require to re-import collections (since they are migrated to the latest version, too). But it has been so long since `v7` I'm having hard time...