bids-validator

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Validate numeric values in TSV files use periods for decimal separators, rather than thousands

3

I ended up with an `events.tsv` with this "shape" for numerical value (Excel tried to be too smart once again!!!) and the validator did not pick up on this. Am...

Remi-Gau

Warning when gzip headers contain non-BIDS filenames

4

The original filename might contain identifiable information if NIfTI files are compressed prior to being renamed. We should detect this and raise a warning if the header doesn't match the...

nellh

If a dataset declares itself to have `BIDSVersion` of 1.9.0, it likely is doing so because there are things specified in 1.9.0 that were not present in 1.7.0 or 1.8.0....

effigies

See issue in the bids example: https://github.com/bids-standard/bids-examples/issues/296 This is probably a bug. Suggested course of action. - open a PR to fix validator to throw an error on that dataset...

Remi-Gau

ENOBUFS when calling bin/bids-validator outside of project.

2

Not sure if its an issue with my setup or something else. Happened while testing microscopy PR #1359. If I called bin/bids-validator with an absolute path while outside of the...

rwblair

Currently the validator validates based on a combination of regex and string.includes conditionals in javascript to determine what function should be run on what files/parts of files/groups of files. What...

rwblair

"n/a" for required tag generates "Invalid JSON file"; "else" error?

7

Using the validator to check a publically available PET dataset I got a bunch of "Error 1: [Code 55] JSON_SCHEMA_VALIDATION_ERROR" errors that were generated by "should be number" evidence, however,...

nicholst

Validation generates a message about needing to "trust this site"

1

The validator website includes the message that "Note: Selecting a dataset only performs validation. Files are never uploaded." However, when data is selected for upload the browser counters with something...

arokem

Add Python bindings for bids-validator API

2

Thinking about approaches for improving the accessibility of the validator for Python projects, I took a quick look at how feasible it would be to add Python bindings to the...

nellh

`desc` keyword not allowed in toplevel derivatives dataset

2

I want to create pipelines as derivatives of the Human Connectome dataset. Because I downloaded preprocessed files and for instance want to use the confounds, the toplevel is also a...

huy29433