bids-validator
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bids-standard
Validator for the Brain Imaging Data Structure
Noticed on one of my own dataset but tried the following on the bids example repo to demonstrate ```bash cp qmri_mp2rage/sub-1/anat/sub-1_inv-1_MP2RAGE.json qmri_mp2rage/inv-1_MP2RAGE.json ``` ```bash tree qmri_mp2rage qmri_mp2rage ├── dataset_description.json ├──...
Hi all, I have tried to check one dataset but it dropped an error with the following message: ``` File Path: Internal error. SOME VALIDATION STEPS MAY NOT HAVE OCCURRED...
Some questions keep coming back: having a FAQ could help answering them faster in the future possible entries - are my data uploaded anywhere when I use the validator in...
Help match the openneuro build environment more closely. I didn't need to use any of the workarounds in https://github.com/OpenNeuroOrg/openneuro/blob/master/packages/openneuro-app/vite.config.js to allow vite build to go off. Mosttly stayed with defaults...
~I broke gitlab ci with #1221 (just noticed after merging, because the gitlab ci job is apparently not run on PRs?), then tried to fix it with several commits to...
Databases may use the validator to determine whether to accept a dataset, a practice notably employed by OpenNeuro to keep a low-overhead submission process. With the expansion into new modalities,...
According to [Tabular files](https://bids-specification.readthedocs.io/en/stable/02-common-principles.html#tabular-files): > TSV files MUST be in UTF-8 encoding. We currently don't validate this, which leads to situations when data is encoded in, e.g., ISO-8859 (https://github.com/OpenNeuroOrg/openneuro/issues/2515). This...
`physio` and `stim` suffixes are currently included for [func](https://github.com/bids-standard/bids-specification/blob/master/src/schema/datatypes/func.yaml) and [beh](https://github.com/bids-standard/bids-specification/blob/master/src/schema/datatypes/beh.yaml). But they are not included for the following data types: - [x] EEG: https://github.com/bids-standard/bids-specification/blob/master/src/schema/datatypes/eeg.yaml - [x] iEEG: https://github.com/bids-standard/bids-specification/blob/master/src/schema/datatypes/ieeg.yaml -...
Most software packages of similar size and purpose as bids-validator have a comprehensive documentation. Meanwhile, we have a long README and a CONTRIBUTING file (which is not very visible). What...
Most of the examples in the specification give relative file paths that are lower case. I was wondering what the case requirements were for matching files for inheritance? Is there...
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Validator for the Brain Imaging Data Structure