bids-validator

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[WIP][ENH] Validate data sets following BEP 029 Motion

14

Adding BEP 029 for motion data to validator. Work in progress

sjeung

Update regexp for blood pet to require the recording entity

1

This PR updates the regexp for blood pet data to have the recording entity required in the filename if blood data is present (https://github.com/bids-standard/bids-validator/issues/1499#issue-1336399775). The update is also in line...

mnoergaard

Validator not checking pet blood data

3

We just uploaded https://openneuro.org/datasets/ds004230 that includes blood data, but for some reason the validator did not complain about the blood data not having the recording entity, which it should have?...

mnoergaard

Impmentation and basic unit tests for HEDVersion with libraries

1

This PR implements the bids-validator side of HED library support and is related to: - [bids-specification PR#1106](https://github.com/bids-standard/bids-specification/pull/1106) which incorporates HED library support into the BIDS specification. - [hed-javascript PR#75](https://github.com/hed-standard/hed-javascript/pull/75) which...

VisLab

All the necessary changes to implement a Deno based validator that is schema driven. See https://github.com/bids-standard/bids-validator/issues?q=is%3Aissue+is%3Aopen+schema+label%3Aschema tag for in-progress work.

nellh

"bids-validator" docker imager in "GitHub packages" out of date / undocumented

1

https://github.com/orgs/bids-standard/packages?repo_name=bids-validator Maybe we should automate uploading the image upon release ... and document this as an alternative to DockerHub. docs: https://docs.github.com/en/packages/working-with-a-github-packages-registry/working-with-the-container-registry

sappelhoff

In an effort to forward #1478 this loads a json sidecar with inheritance. Much more straightforward with the current fileTree object compared to old validator way. The call to load...

rwblair

Path Issues; Validator Unable to Locate Files or Folders if Unwise Characters Present in Folder Name

1

Recently was running the validator on a dataset as one does, but after renaming the dataset to better reflect the accompanying paper I began to run into issues w/ the...

bendhouseart

see spec issue: - https://github.com/bids-standard/bids-specification/issues/952 Optional metadata fields and files that are n/a should just be omitted. For example an `events.tsv` file with just headers.

sappelhoff

BIDS URI support

2

xref https://github.com/bids-standard/bids-specification/pull/918 Minimally we need: - [x] Permit `dataset_description.DatasetLinks` object * Empty string as a key is an error * Values are URIs (relative paths accepted) - [ ] Handle...

effigies