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### What happened? https://github.com/hail-is/hail/pull/12788 Complete review and address issues noted by Tim in comments. ### Version 0.2.127 ### Relevant log output _No response_

danking

This changes the execution semantics for the Spark backend. Instead of dispatching either to (a) a two-pass algorithm that scans and coalesces (shuffle=False) or (b) a two-pass algorithm that shuffles...

tpoterba

### What happened? ```python3 --- Logging error --- Traceback (most recent call last): File "/usr/lib/python3.9/logging/__init__.py", line 1083, in emit msg = self.format(record) File "/usr/lib/python3.9/logging/__init__.py", line 927, in format return fmt.format(record)...

danking

Update MatrixTable.show

3

### Description In this pull request, I change the implementation of the `MatrixTable.show` method. Previously, `show` would create a table and then show the table by reusing the table implementation...

Will-Tyler

[lint] runs ruff linter on hail/ subdirectory

2

Unexcludes the `hail/` subdirectory from the files the `ruff` linter (not to be confused with the `ruff` formatter) looks at, and fixes the errors it raises.

iris-garden

[query] implement the Cochran–Mantel–Haenszel test for repeated tests of independence

1

### What happened? @jkgoodrich requested this. It appears to be a fairly straightforward manipulation of the four variables. Hail already has the chi-squared CDF. I think we can implement this...

danking

[packaging] hail anaconda recipe is outdated

1

### What happened? [a user attempted to run `conda install bioconda::hail` or some variation of that](https://hail.zulipchat.com/#narrow/stream/123010-Hail-Query-0.2E2-support/topic/jdk11/near/418930859), and it looks like [the hail package on anaconda.org](https://anaconda.org/bioconda/hail) has [a dependency](https://bioconda.github.io/recipes/hail/README.html) on `openjdk...

iris-garden

For the normal, poisson, and chi-square distributions, we have sampling (`rand_norm`), density (`dnorm`), cumulative probability (`pnorm`), and quantile (`qnorm`) functions. For beta and gamma distributions we only have the sampling...

patrick-schultz

### What happened? ```ipython In [1]: import hailtop.batch as hb ...: b = hb.Batch(backend=hb.ServiceBackend()) ...: j = b.new_job() ...: j.always_run() ...: b.run() ``` As a user, I would expect the...

danking

[query] bad error message when indexing a matrix table with row keys

1

### What happened? I expected this to raise an error with a message like "when indexing a matrix table, you must provide a row key and column key". ``` In...

danking