hail icon indicating copy to clipboard operation
hail copied to clipboard

Cloud-native genomic dataframes and batch computing

Results 235 hail issues
Sort by recently updated
recently updated
newest added

This makes hand running the release slightly less error-prone.

Hi! I know this is out of the blue, but we would like the ability to fetch resource_usage data from an endpoint programmatically to evaluate our job performance. I thought...

In Hail Query, we need to prevent reading from cold storage as well as writing to cold storage (which we already appear to be preventing).

### What happened? Removing the FIXME messages in `hailtop.batch_client.aioclient` in favor of a proper issue. This error needs to be fixed for `hailtop.batch_client.aioclient.JobGroup` as well once that code merges with...

new-feature
batch

### What happened? Something is wrong with the largeDirectoryOperations test. It occasionally fails because a file still exists. I do not know why. Example: https://batch.hail.is/batches/8059890/jobs/202 ``` starting test is.hail.io.fs.GoogleStorageFSSuite.largeDirectoryOperations... Exception:...

bug
fs

### What happened? We have a dataset with joint call multi-sample VCF files (not from imputation). We converted those multi-sample VCFs to hailmatrix tables with following WDL code in Terra:...

needs-triage

@danking I have a mostly completed draft for SAIGE in QoB. Can you take a look? I'm mainly looking for enough feedback to get a green light to actually start...

do-not-test