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Cloud-native genomic dataframes and batch computing

Results 235 hail issues
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### What happened? On GNU/Linux, when spawning a process, there are practical limits to the size of the arguments array *and* the environment. These limits are documented in [the `execve`...

new-feature
batch

Reference GT/PGT may have ploidy information, so we need to stop dropping the GT/PGT.

### What happened? From: https://discuss.hail.is/t/connectionerror-after-mt-aggregate-cols-hl-agg-collect-and-hl-nd-array-in-linear-skat/3839 The following code snippet blows up from OOM. Interestingly, I can only reproduce for `_localize=False`, indicating we have an problem with our `Emit` rule for...

needs-triage
query

### What happened? Hail propagates nicely explained error messages from java to python when an exception is thrown in the user's pipeline. However, the hail python front end does not...

enhancement
query
snack

This revamps the `batch.front_end` web pages to be a bit less cluttered and more usable. I brought in tailwindcss instead of using our existing sass. I mainly find it easier...

WIP

As reported by Variants team, some of the sex chromosome reference calls are haploid. We previously assumed that all reference calls were diploid. That assumption no longer holds, so we...