David Gault
David Gault
Thanks again for providing the sample file Stephen. For the rest of the OME team, the file is available under `inbox/gh-4066`
Thanks @anntzer for raising the issue, this is something we will likely have to profile to determined exactly which operations are causing the reduced performance.
Tested the provided sample files and have been able to reproduce the same issue with Bio-Formats 7.1.0. The issue does indeed seem to be linked to sizeZ being set to...
Hi @anntzer, if you were able to do some profiling that would be a great help. One tool I would recommend using would be [VisualVM](https://visualvm.github.io/). If you open VisualVM and...
Thanks @anntzer, was that for the full file? If so it looks like the majority of the time is spent writing the metadata values rather than the pixel data, so...
Hi @anntzer, thank you for raising the issue and investigating the problem. Making DataTools.readFile more flexible to also allow for the charset to be input seems like a good solution...
Thanks @anntzer, I will try to get those opened as PR's in the next few days
Thank you @carandraug for opening the PR and the continued support for the the project. Since your previous contributions we have introduced a Contributor License Agreement for the project, would...
Hi @dsudar, apologies for the slow response time as I was away on holiday and I am just catching up. Looking at some of our samples and they also include...
Hi @CGDogan, Im afraid the full data repository is not available as many of the files are private. You can find the publicly available sample files at https://downloads.openmicroscopy.org/images/ The repository...