David Gault

Hi @XLEFReaderForBioformats, the next step will be to reinclude the PR in the nightly CI, testing the new reader rather than the legacy reader. If we can get a full...

Hi @XLEFReaderForBioformats, as a follow up, the PR has been included in our test suite for a number of days and we are seeing failures for a number of files,...

Failures relate to the 16bit tests, requires further investigation

Thanks @TBlackmore for opening the PR, if are able to provide some sample files that would greatly help the testing. Also, we have a Contributor License Agreement for the project,...

Thanks @TBlackmore, having the samples to test with is a great help, we will aim to get this PR reviewed within the next week and let you know if there...

Thanks @scuniff for the testing, if you are happy that solution is working then do you want to open it as a PR and we can test it against our...

Thanks @jboulanger, with the latest Bio-Formats it seems to have picked up 2 series, both labeled as macro image, the first 152 x 167 (3 channels) and the second 62...

A similar issue has been reported in forum thread https://forum.image.sc/t/open-vsi-ome-tiff-files-with-tif-pixel-data/96327/9 A sample dataset acquired from Olympus VS200 has been provided and reproduces the issue with Bio-Formats 7.3.0. The samples files...

Thank you @anntzer for opening the issue and investigating the root cause, that is extremely helpful. This is perhaps something we can look at addressing alongside https://github.com/ome/bioformats/issues/4069 at the same...

@stephenshank, do you have a sample file that we could use to reproduce the exception? If you need a suitable upload location then we recommend using https://zenodo.org/